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smartdata-analysis-and-statistics · Dec 18, 2023 · c547d65 · c547d65
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diff --git a/.nojekyll b/.nojekyll
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-29f3f078
+143b16db
diff --git a/authors.html b/authors.html
@@ -293,25 +293,33 @@ <h1 class="title"><span class="chapter-number">11</span>&nbsp; <span class="chap
 <td>National Institute for Health and Care Excellence (NICE), London, United Kingdom</td>
 </tr>
 <tr class="even">
+<td><a href="https://orcid.org/0000-0003-2420-5716">Jessica L. Rohmann</a></td>
+<td>Charité, Universitätsmedizin Berlin, Berlin, Germany</td>
+</tr>
+<tr class="odd">
 <td><a href="https://orcid.org/0000-0002-2384-5415">Johanna Muñoz</a></td>
 <td>Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands</td>
 </tr>
-<tr class="odd">
+<tr class="even">
 <td><a href="https://orcid.org/0000-0001-7061-3767">Katrine Strandberg-Larsen</a></td>
 <td>Department of Public Health, University of Copenhagen, Copenhagen, Denmark</td>
 </tr>
-<tr class="even">
+<tr class="odd">
 <td><a href="https://orcid.org/0000-0001-9718-021X">Konstantina Chalkou</a></td>
 <td>Institute of Social and Preventive Medicine (ISPM), University of Bern, Bern, Switzerland</td>
 </tr>
-<tr class="odd">
+<tr class="even">
 <td><a href="https://orcid.org/0000-0002-0346-2871">Mohammad Ehsanul Karim</a></td>
 <td>School of Population and Public Health, University of British Columbia, Vancouver, Canada</td>
 </tr>
-<tr class="even">
+<tr class="odd">
 <td><a href="https://orcid.org/0000-0002-6887-5706">Tammy Jiang</a></td>
 <td>Biogen, Cambridge, MA, United States</td>
 </tr>
+<tr class="even">
+<td><a href="https://orcid.org/0000-0001-6485-9947">Tat Thang Vo</a></td>
+<td>The Wharton School, The University of Pennsylvania, Philadelphia, Pennsylvania, United States</td>
+</tr>
 </tbody>
 </table>
 

diff --git a/chapter_07.html b/chapter_07.html
@@ -1862,8 +1862,8 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
 [52] lifecycle_1.0.4         chk_0.9.1               stringi_1.8.3          
 [55] yaml_2.3.8              carData_3.0-5           promises_1.2.1         
 [58] crayon_1.5.2            lattice_0.20-45         splines_4.2.3          
-[61] pander_0.6.5            pillar_1.9.0            igraph_1.6.0           
-[64] uuid_1.1-1              codetools_0.2-19        crul_1.4.0             
+[61] pander_0.6.5            pillar_1.9.0            uuid_1.1-1             
+[64] igraph_1.6.0            codetools_0.2-19        crul_1.4.0             
 [67] glue_1.6.2              evaluate_0.23           msm_1.7.1              
 [70] mitools_2.4             fontLiberation_0.1.0    data.table_1.14.10     
 [73] vctrs_0.6.5             httpuv_1.6.13           gtable_0.3.4           

diff --git a/chapter_10.html b/chapter_10.html
@@ -860,16 +860,16 @@ <h3 data-number="6.3.1" class="anchored" data-anchor-id="interventions-for-coron
    plus standard error of the mean:
 
               Mean      SD  Naive SE Time-series SE
-d.STD.REM  -0.1076 0.09757 0.0005633      0.0008000
-d.STD.TOCI -0.1122 0.08214 0.0004742      0.0008098
-sd.d        0.1126 0.08766 0.0005061      0.0017579
+d.STD.REM  -0.1086 0.09739 0.0005623      0.0008007
+d.STD.TOCI -0.1122 0.08272 0.0004776      0.0008179
+sd.d        0.1128 0.08863 0.0005117      0.0016525
 
 2. Quantiles for each variable:
 
                 2.5%      25%      50%      75%   97.5%
-d.STD.REM  -0.316478 -0.16022 -0.10427 -0.05156 0.08405
-d.STD.TOCI -0.258217 -0.16295 -0.11960 -0.06962 0.07662
-sd.d        0.004789  0.04533  0.09483  0.15828 0.32754</code></pre>
+d.STD.REM  -0.317134 -0.16162 -0.10394 -0.05227 0.08146
+d.STD.TOCI -0.256467 -0.16358 -0.11974 -0.06952 0.08152
+sd.d        0.004703  0.04619  0.09335  0.15812 0.33068</code></pre>
 </div>
 </div>
 <p>The corresponding odds ratios are as follows:</p>
@@ -885,15 +885,15 @@ <h3 data-number="6.3.1" class="anchored" data-anchor-id="interventions-for-coron
 <tbody>
 <tr class="odd">
 <td style="text-align: left;">REM vs. STD</td>
-<td style="text-align: center;">0.9 (0.73; 1.09)</td>
+<td style="text-align: center;">0.9 (0.73; 1.08)</td>
 </tr>
 <tr class="even">
 <td style="text-align: left;">TOCI vs. STD</td>
 <td style="text-align: center;">0.89 (0.77; 1.08)</td>
 </tr>
 <tr class="odd">
 <td style="text-align: left;">REM vs. TOCI</td>
-<td style="text-align: center;">1.02 (0.75; 1.26)</td>
+<td style="text-align: center;">1.01 (0.75; 1.26)</td>
 </tr>
 </tbody>
 </table>
@@ -1342,12 +1342,12 @@ <h3 data-number="6.3.3" class="anchored" data-anchor-id="advanced-therapies-for-
 <span id="cb24-5"><a href="#cb24-5" aria-hidden="true" tabindex="-1"></a>sucra.uc<span class="sc">$</span>ranking.random</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <div class="cell-output cell-output-stdout">
 <pre><code> ADA160/80     FIL100     FIL200 GOL200/100      INF10       INF5    OZA0.92 
-0.27545455 0.19454545 0.40545455 0.63909091 0.60181818 0.75363636 0.77818182 
+0.28363636 0.16818182 0.44000000 0.61818182 0.61636364 0.75909091 0.74909091 
        PBO      TOF10      UPA45       UST6     VED300 
-0.01818182 0.39454545 0.98454545 0.34090909 0.61363636 </code></pre>
+0.01727273 0.42090909 0.97181818 0.35272727 0.60272727 </code></pre>
 </div>
 </div>
-<p>These results indicate that 98.5% of the evaluated treatments are worse than <code>UPA45</code>.</p>
+<p>These results indicate that 97.2% of the evaluated treatments are worse than <code>UPA45</code>.</p>
 </section>
 </section>
 <section id="version-info" class="level2 unnumbered">

diff --git a/chapter_11.html b/chapter_11.html
@@ -755,29 +755,30 @@ <h2 class="unnumbered anchored" data-anchor-id="version-info">Version info</h2>
  [7] Formula_1.2-5       shiny_1.8.0         metafor_4.4-0      
 [10] yaml_2.3.8          numDeriv_2016.8-1.1 R2WinBUGS_2.1-22   
 [13] pillar_1.9.0        lattice_0.20-45     glue_1.6.2         
-[16] digest_0.6.33       promises_1.2.1      rvest_1.0.3        
-[19] minqa_1.2.6         colorspace_2.1-0    R2jags_0.7-1       
-[22] mcmcplots_0.4.3     htmltools_0.5.7     httpuv_1.6.13      
-[25] Matrix_1.6-4        pkgconfig_2.0.3     purrr_1.0.2        
-[28] xtable_1.8-4        scales_1.3.0        webshot_0.5.5      
-[31] svglite_2.1.3       rjags_4-15          later_1.3.2        
-[34] metadat_1.2-0       lme4_1.1-35.1       tibble_3.2.1       
-[37] farver_2.1.1        generics_0.1.3      ellipsis_0.3.2     
-[40] withr_2.5.2         cli_3.6.2           magrittr_2.0.3     
-[43] mime_0.12           evaluate_0.23       fansi_1.0.6        
-[46] nlme_3.1-162        MASS_7.3-58.2       xml2_1.3.6         
-[49] tools_4.2.3         lifecycle_1.0.4     stringr_1.5.1      
-[52] munsell_0.5.0       compiler_4.2.3      systemfonts_1.0.5  
-[55] rlang_1.1.2         nloptr_2.0.3        grid_4.2.3         
-[58] rstudioapi_0.15.0   CompQuadForm_1.4.3  htmlwidgets_1.6.4  
-[61] miniUI_0.1.1.1      labeling_0.4.3      rmarkdown_2.25     
-[64] boot_1.3-28.1       gtable_0.3.4        codetools_0.2-19   
-[67] abind_1.4-5         R6_2.5.1            gridExtra_2.3      
-[70] knitr_1.45          denstrip_1.5.4      fastmap_1.1.1      
-[73] utf8_1.2.4          mathjaxr_1.6-0      ggExtra_0.10.1     
-[76] stringi_1.8.3       parallel_4.2.3      Rcpp_1.0.11        
-[79] vctrs_0.6.5         tidyselect_1.2.0    xfun_0.41          
-[82] coda_0.19-4        </code></pre>
+[16] digest_0.6.33       RColorBrewer_1.1-3  promises_1.2.1     
+[19] minqa_1.2.6         rvest_1.0.3         colorspace_2.1-0   
+[22] R2jags_0.7-1        Matrix_1.6-4        mcmcplots_0.4.3    
+[25] htmltools_0.5.7     httpuv_1.6.13       plyr_1.8.9         
+[28] pkgconfig_2.0.3     purrr_1.0.2         xtable_1.8-4       
+[31] scales_1.3.0        webshot_0.5.5       svglite_2.1.3      
+[34] rjags_4-15          later_1.3.2         ggstats_0.5.1      
+[37] metadat_1.2-0       lme4_1.1-35.1       tibble_3.2.1       
+[40] farver_2.1.1        generics_0.1.3      ellipsis_0.3.2     
+[43] withr_2.5.2         cli_3.6.2           magrittr_2.0.3     
+[46] mime_0.12           evaluate_0.23       GGally_2.2.0       
+[49] fansi_1.0.6         nlme_3.1-162        MASS_7.3-58.2      
+[52] xml2_1.3.6          tools_4.2.3         lifecycle_1.0.4    
+[55] stringr_1.5.1       munsell_0.5.0       compiler_4.2.3     
+[58] systemfonts_1.0.5   rlang_1.1.2         nloptr_2.0.3       
+[61] grid_4.2.3          rstudioapi_0.15.0   CompQuadForm_1.4.3 
+[64] htmlwidgets_1.6.4   miniUI_0.1.1.1      labeling_0.4.3     
+[67] rmarkdown_2.25      boot_1.3-28.1       gtable_0.3.4       
+[70] codetools_0.2-19    abind_1.4-5         R6_2.5.1           
+[73] gridExtra_2.3       knitr_1.45          denstrip_1.5.4     
+[76] fastmap_1.1.1       utf8_1.2.4          mathjaxr_1.6-0     
+[79] ggExtra_0.10.1      stringi_1.8.3       parallel_4.2.3     
+[82] Rcpp_1.0.11         vctrs_0.6.5         tidyselect_1.2.0   
+[85] xfun_0.41           coda_0.19-4        </code></pre>
 </div>
 </div>
 </section>