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    9 repositories

    • pipelines

      Public
      A monorepo containing all of our Nextflow pipelines.
      Nextflow
      •
      Apache License 2.0
      •0•1•0•0•Updated Jan 10, 2025Jan 10, 2025

    • miso

      Public
      An R package containing a bunch of helpers for microbiome data analysis.
      R
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 3, 2024Dec 3, 2024

    • gapseq-docker

      Public
      A docker image for gapseq.
      Dockerfile
      •
      Apache License 2.0
      •1•0•0•0•Updated Nov 21, 2024Nov 21, 2024

    • .github

      Public
      Lab manuals, policies and highlights.
      Shell
      •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

    • talks

      Public
      Repository for public talk slides.
      JavaScript
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 11, 2024Sep 11, 2024

    • website

      Public
      Our lab website.
      HTML
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 20, 2024Aug 20, 2024

    • medi

      Public
      Metagenomic Estimation of Dietary Intake and Content.
      R
      •
      Apache License 2.0
      •5•0•0•0•Updated Jul 29, 2024Jul 29, 2024

    • nextflow_intro

      Public
      Intro to Nextflow and instructions on how to run pipelines at the MedUni Graz.
      Nextflow
      •
      Apache License 2.0
      •0•0•0•0•Updated May 17, 2024May 17, 2024

    • 2024_micom_intro

      Public
      A short intro to MICOM.
      Jupyter Notebook
      •
      Apache License 2.0
      •0•1•0•0•Updated Apr 5, 2024Apr 5, 2024