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feat: add MuSE as new somatic variant caller #166

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feat: add MuSE as new somatic variant caller

feat: add MuSE as new somatic variant caller #166

Triggered via pull request December 5, 2024 14:34
@famosabfamosab
synchronize #1744
famosab:muse
Status Cancelled
Total duration 15m 0s
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pytest.yml

on: pull_request
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Matrix: pytest
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freebayes docker NF 24.04.2
Canceling since a higher priority waiting request for 'pytest-workflow-1744' exists
freebayes docker NF latest-everything
Canceling since a higher priority waiting request for 'pytest-workflow-1744' exists
cnvkit docker NF 24.04.2
Canceling since a higher priority waiting request for 'pytest-workflow-1744' exists
mutect2 docker NF latest-everything
Canceling since a higher priority waiting request for 'pytest-workflow-1744' exists
cnvkit docker NF latest-everything
Canceling since a higher priority waiting request for 'pytest-workflow-1744' exists
mutect2 docker NF 24.04.2
Canceling since a higher priority waiting request for 'pytest-workflow-1744' exists
Check for changes (pytest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
msisensorpro docker NF latest-everything
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
msisensorpro docker NF 24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
mpileup docker NF latest-everything
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
controlfreec docker NF latest-everything
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
mpileup docker NF 24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
controlfreec docker NF 24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
manta docker NF latest-everything
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tiddit docker NF 24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
concatenate_vcfs docker NF latest-everything
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
tiddit docker NF latest-everything
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
manta docker NF 24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
concatenate_vcfs docker NF 24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
confirm-pass
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636