cornell-TREX / GG02 Public

forked from bixBeta/GG02

dev environment for gg02 biohpc

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Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
3.3.sh		3.3.sh
Broccoli.sorted.gff		Broccoli.sorted.gff
README.md		README.md
archive.sh		archive.sh
atacQC.R		atacQC.R
bedGraphs.sh		bedGraphs.sh
beta4.sh		beta4.sh
beta5.sh		beta5.sh
countMatrix.sh		countMatrix.sh
fq.screen.sh		fq.screen.sh
geneSwitch.R		geneSwitch.R
gff.Hash.Aegl5.0 txt		gff.Hash.Aegl5.0 txt
html.atacQC.sh		html.atacQC.sh
knit.atacQC.R		knit.atacQC.R
my.fastq.conf		my.fastq.conf
processCounts.sh		processCounts.sh
processFeatureCounts.sh		processFeatureCounts.sh
qc.atac.Rmd		qc.atac.Rmd
smRNA.beta3.sh		smRNA.beta3.sh
starIndex.sh		starIndex.sh
starMono.sh		starMono.sh
starMono2.sh		starMono2.sh
starSolo.sh		starSolo.sh
trim.sh		trim.sh
trimSmall.sh		trimSmall.sh
xTREX.sh		xTREX.sh
xbeta2.sh		xbeta2.sh
xbeta4.sh		xbeta4.sh
xsmRNA.beta2.sh		xsmRNA.beta2.sh