environment.yml

# This file has been generated by running the command:
# `conda env export --name sbas --no-builds --from-history | grep -v "^prefix: " > environment.yml`
name: sbas
channels:
  - conda-forge
  - defaults
  - bioconda
  - r
  - anaconda
dependencies:
  - conda
  - python
  - tini=0.18.0
  - notebook=6.0.3
  - jupyterhub=1.1.0
  - jupyterlab=2.0.1
  - matplotlib-base=3.2
  - h5py=2.10
  - numba=0.48
  - xlrd
  - ipympl=0.5
  - cython=0.29
  - bottleneck=1.3
  - conda-forge::blas[build=openblas]
  - seaborn=0.10
  - numexpr=2.7
  - scipy=1.4
  - dask=2.14
  - protobuf=3.11
  - sqlalchemy=1.3
  - hdf5=1.10
  - vincent=0.4
  - scikit-learn=0.22
  - cloudpickle=1.3
  - widgetsnbextension=3.5
  - ipywidgets==7.5.1
  - patsy=0.5
  - pytables=3.6
  - beautifulsoup4=4.8
  - statsmodels=0.11
  - sympy=1.5
  - bokeh=2.0
  - pandas=1.0
  - dill=0.3
  - scikit-image=0.16
  - rpy2=3.1
  - r-nycflights13=1.0
  - r-forecast=8.11
  - r-randomforest=4.6
  - r-hexbin=1.28
  - r-rcurl=1.98
  - r-irkernel=1.1
  - r-tidyverse=1.3
  - r-htmltools=0.4
  - r-htmlwidgets=1.5
  - r-rmarkdown=2.1
  - r-rsqlite=2.2
  - r-shiny=1.4
  - r-plyr=1.8
  - r-base
  - r-crayon=1.3
  - r-reshape2=1.4
  - r-devtools=2.2
  - r-caret=6.0
  - conda-forge::nb_conda_kernels
  - krb5
  - curl
  - gsl
  - nbdime
  - papermill
  - r-languageserver==0.3.5
  - nbval
  - bash_kernel
  - nodejs
  - python-language-server==0.32.0
  - jupytext
  - libcurl
  - bash
  - plotly-orca==1.3.1
  - psutil==5.7.0
  - plotly=4.7.1
  - bioconductor-rtracklayer
  - r-dplyr
  - bioconductor-biobase
  - r-r.utils
  - r-tibble
  - mamba
  - r-vctrs
  - r-rlang[version='>=0.4.7-y']
  - r-pheatmap
  - r-snakecase
  - r-stringr
  - r-magrittr
  - r-ggplot2
  - r-viridis
  - jupyter_client==6.1.5
  - bioconductor-edger
  - bioconductor-genomeinfodb
  - bioconductor-genomeinfodbdata